Antibody (Ab) plays critical roles in both therapeutic and diagnostic applications. Though antibody engineering has enabled high yield of antigen-specific Ab binders, further identification of functional ones, which are often relevant to conformational epitopes, remains a time and cost-intensive endeavor.

Here, we proposed an in-silico tool, SESA, to screen those Abs targeting a pre-defined epitope area by calculating the physio-chemical complementarity between epitopes and paratope pairs.

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Submission Types & Task Query

Start Screening task

We provide 3 types of antibody screening and support task query.

1. via using the build-in antibody library from PDB

2,867 unique antibody structures

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2. via submitting the user-defined antibody CDR structure library

Please pack your CDR PDB files as a ".zip" file

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3. via submitting the user-defined antibody sequence library

Please upload your Heavy chain and Light chain Fab sequences as two individual ".fasta" files

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Query previous Results

Please enter your job-ID to query previous calculated results (kept for 30 days).

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Algorithm Advantages

A website for epitope specific antibody screening

  • The first antibody screening tool designed for specific epitopes.
  • High computational efficiency (≈ 5,491 pairs/s) .
  • Antibody sequences and structures are both welcomed as input.
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